PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100021710041
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 354aa    MW: 40135.4 Da    PI: 4.5158
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100021710041genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.72.4e-123995155
                           AP2  1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                                  s y+GV++++++gr++A+++d  ++n  ++kr +   ++ +e+Aa+ ++ a++k++g
  Ote100021710041|100021710041 39 SVYRGVTRHRWTGRFEAHLWDkTTWNSiQNKRGRQSAYDNEEDAARTYDLAALKYWG 95
                                  78*******************66669999999999********************98 PP

2AP226.71.4e-08138170136
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 
                                   s+y+GV +++ +grW+A+I  ++    +k+ +lg++
  Ote100021710041|100021710041 138 SKYRGVARHHHNGRWEARIGRVCG---NKYLYLGTY 170
                                   89****99***********99644...4*******9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.78E-1639102No hitNo description
SuperFamilySSF541712.48E-1339104IPR016177DNA-binding domain
PfamPF008473.0E-93995IPR001471AP2/ERF domain
SMARTSM003808.0E-1540109IPR001471AP2/ERF domain
PROSITE profilePS5103217.42540103IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.6E-1140103IPR001471AP2/ERF domain
PfamPF008471.9E-4138170IPR001471AP2/ERF domain
SuperFamilySSF541711.37E-5138179IPR016177DNA-binding domain
SMARTSM003805.8E-6139185IPR001471AP2/ERF domain
PROSITE profilePS510328.61139171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-4139171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MAPSPSPSPS PNAXXXXXXX XXXXNQSDNS ATSPKSRSSV YRGVTRHRWT GRFEAHLWDK  60
TTWNSIQNKR GRQSAYDNEE DAARTYDLAA LKYWGPSTIL NFSVEAYTKD LEEMQKLTKE  120
EYLASLRRRS SGFSRGVSKY RGVARHHHNG RWEARIGRVC GNKYLYLGTY SPNAVTNFDI  180
SNYADKLRKF LPEVQDRQEE EVIVKEETNL VPLEEVQTDE AHDNQEDPKK VVETSNPMPE  240
SKDSNESEAI NIMDMTEAHE HPWDLCLDTV FNILPIPEFS MGKASEVFDY QGFDDDIDYI  300
FDEPLDENEI LQDAMPSSCQ VDADALVAQD LKVRDATTSP SSSLSSTTSA CSDI
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078716.11e-151PREDICTED: ethylene-responsive transcription factor WRI1-like
SwissprotQ6X5Y64e-94WRI1_ARATH; Ethylene-responsive transcription factor WRI1
TrEMBLA0A0R5QQ641e-173A0A0R5QQ64_SALMI; AP2 / EREBP Transcription Factor
STRINGPGSC0003DMT4000707351e-104(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91342227